U01.03.015 Bacterial genetics

Horizontal gene transfer is the main mechanism by which bacteria exchange genetic material, including antibiotic resistance genes. The major processes include transformation, conjugation, transduction, and transposition.


Transformation

  • Uptake of naked DNA from the environment (from lysed bacteria).
  • Leads to stable integration and expression of new genes.
  • Blocked by DNase (degrades naked DNA).
  • Classically seen in: SHiN bacteria (Streptococcus pneumoniae, Haemophilus influenzae type b, Neisseria).
  • Mnemonic: “SHiN organisms are transformed.”

Conjugation

F+ × F−:

  • F+ cell carries the fertility plasmid (F factor) with sex pilus genes.
  • Transfers a copy of plasmid DNA only (no chromosomal DNA).
  • F− cell becomes F+.

Hfr × F−:

  • When the F plasmid integrates into bacterial chromosome = Hfr cell (high-frequency recombination).
  • During conjugation, leading portion of plasmid plus some adjacent chromosomal genes are transferred.
  • Recipient remains F− but may acquire new bacterial genes.

Transduction

Generalized:

  • Lytic phage mistakenly packages bacterial DNA into its capsid.
  • Transfers random bacterial genes to another bacterium.

Specialized:

  • Lysogenic phage integrates into the bacterial genome.
  • Upon excision, adjacent bacterial genes are carried into the phage and transferred.
  • Important toxins carried by lysogenic phage:
    • A: Group A strep erythrogenic toxin
    • B: Botulinum toxin
    • C: Cholera toxin
    • D: Diphtheria toxin
    • S: Shiga toxin
  • Mnemonic: ABCD’S toxins.


Transposition

  • “Jumping genes.”
  • DNA segments (transposons) excise and reinsert at different sites.
  • It can move between plasmids and chromosomes.
  • Important in antibiotic resistance transfer across species (eg, vanA gene from Enterococcus to Staphylococcus aureus).

Comparison Table

Mechanism Key Feature DNA Transferred Example / Importance
Transformation Uptake of naked DNA Chromosomal fragments SHiN organisms; blocked by DNase
Conjugation (F+ × F−) Plasmid transfer via sex pilus Plasmid DNA only Antibiotic resistance plasmids
Conjugation (Hfr × F−) Plasmid is integrated into the chromosome. Plasmid + flanking chromosomal DNA High-frequency recombination
Transduction (generalized) Lytic phage packaging error Random bacterial DNA Any bacterial genes
Transduction (specialized) Lysogenic phage excision Specific bacterial genes + phage DNA ABCD’S toxins
Transposition Jumping DNA segments Plasmid ↔ Chromosome Multi-drug resistance plasmids

Learning Objective (USMLE Step 1): Understand the mechanisms of horizontal gene transfer in bacteria, recognize their role in the spread of antibiotic resistance, and identify which bacterial toxins are encoded by lysogenic phages.


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