U01.02.018 Antibody Structure and Function

Learning Objective:

Understand the structural features of antibodies, mechanisms of antigen recognition, effector functions, and generation of diversity for USMLE Step 1.


Antibody Structure

Feature Composition Function
Fab fragment Light (L) + Heavy (H) chains Binds antigen; determines idiotype (unique antigen-binding pocket; one specificity per B cell)
Fc region Heavy chain constant region Mediates effector functions: complement fixation (IgM, IgG), macrophage binding, and determines isotype
Heavy chain VH, D, JH, CH1-3 Contributes to Fab (variable) and Fc (constant) regions
Light chain VL, JL, CL Contributes only to Fab
Hinge region Flexible linker Provides mobility for Fab arms
Hypervariable regions Variable domain Sites for antigen recognition

Abbreviations:

  • V = Variable, C = Constant, SS = Disulfide bonds
  • CH = constant heavy, CL = constant light, VH = variable heavy, VL = variable light

Antibody Functions

Function Mechanism
Neutralization Blocks bacterial/viral adherence to host cells
Opsonization Mark’s pathogens for phagocytosis by macrophages
Complement activation Fc region of IgM/IgG activates C1 → MAC → lysis
Isotype effector functions Fc determines interaction with immune cells and complement

Activity


Generation of Antibody Diversity

Antigen-Independent (Before Antigen Exposure)

  1. Random recombination of V(D)J (heavy chain) or VJ (light chain) genes → mediated by RAG1/2
  2. Nucleotide addition by TdT
  3. Random pairing of heavy and light chains

Antigen-Dependent (After Antigen Exposure)

  1. Somatic hypermutation & affinity maturation → improves antigen specificity in the variable region
  2. Isotype (class) switching → changes Fc region (IgM → IgG, IgA, IgE) without altering antigen specificity

Activity


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