M03.01.002 Nucleotide Structure and Nomenclature

Learning Objective: Describe the structural components of nucleic acids—including pentose sugars, nitrogenous bases, nucleosides, and nucleotides—and distinguish between purines, pyrimidines, and the differences between DNA and RNA.


Nucleic Acids and Their Components

Nucleic acids (DNA and RNA) are polymers assembled from nucleotides, each containing:

  • A nitrogenous base
  • A five-carbon sugar (pentose)
  • One or more phosphate groups

Activity


Five-Carbon Sugars

The pentose determines the type of nucleic acid:

  • Ribose → RNA
  • Deoxyribose → DNA

Deoxyribose lacks an oxygen at the 2′ carbon, making DNA more stable.


Nitrogenous Bases

Nitrogenous bases are of two types:

Purines (Two Rings)

  • Adenine (A)
  • Guanine (G) (found in both DNA and RNA)

Other purine metabolites (not in nucleic acids): xanthine, hypoxanthine, uric acid

Pyrimidines (One Ring)

  • Cytosine (C): DNA & RNA
  • Thymine (T): DNA only
  • Uracil (U): RNA only

Activity


Nucleosides and Nucleotides

Nucleosides

Base + sugar (bonded at the 1′ carbon)

Nucleotides

Nucleoside + phosphate(s) at the 5′ carbon

  • Mono-, di-, or triphosphates
  • Di- and triphosphates (e.g., ATP) contain high-energy phosphate bonds

Common Examples

  • UMP – uridine monophosphate
  • ATP – adenosine triphosphate
  • dGMP – deoxyguanosine monophosphate

“Deoxy-” is often omitted for thymine derivatives because they naturally occur with deoxyribose.


Activity


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